Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | ED600_RS18140 | Not Available | Negative | 3694915 - 3695538 | 23594.1 |
| nad-dependent dna ligase ligb | ED600_RS18145 | Not Available | Positive | 3695796 - 3697478 | 63325.0 |
| trimeric intracellular cation channel family protein | ED600_RS18150 | Not Available | Negative | 3697475 - 3698092 | 22049.8 |
| dna damage-inducible protein d | ED600_RS18155 | Not Available | Negative | 3698384 - 3699208 | 31163.7 |
| yicc family protein | ED600_RS18160 | Not Available | Negative | 3699429 - 3700292 | 33160.9 |
| ribonuclease ph | ED600_RS18165 | Not Available | Positive | 3700419 - 3701135 | 25327.4 |
| orotate phosphoribosyltransferase | ED600_RS18170 | Not Available | Positive | 3701201 - 3701842 | 23538.3 |
| nucleoid occlusion factor slma | ED600_RS18175 | Not Available | Negative | 3701879 - 3702475 | 22837.7 |
| dutp diphosphatase | ED600_RS18180 | Not Available | Negative | 3702582 - 3703040 | 16288.7 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | ED600_RS18185 | Not Available | Negative | 3703018 - 3704238 | 43440.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





