Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ldr family protein | ED600_RS16535 | Not Available | Negative | 3371320 - 3371427 | 3882.93 |
| type i toxin-antitoxin system toxin ldr family protein | ED600_RS16540 | Not Available | Negative | 3371803 - 3371970 | 6172.64 |
| transporter | ED600_RS16545 | Not Available | Positive | 3372386 - 3373657 | 47292.4 |
| dipeptide abc transporter atp binding subunit dppf | ED600_RS16550 | Not Available | Negative | 3373687 - 3374691 | 37554.6 |
| dipeptide abc transporter atp-binding protein | ED600_RS16555 | Not Available | Negative | 3374688 - 3375671 | 35830.6 |
| dipeptide abc transporter permease dppc | ED600_RS16560 | Not Available | Negative | 3375682 - 3376584 | 32310.5 |
| dipeptide abc transporter permease dppb | ED600_RS16565 | Not Available | Negative | 3376594 - 3377613 | 37465.4 |
| dipeptide abc transporter substrate-binding protein dppa | ED600_RS16570 | Not Available | Negative | 3377764 - 3379371 | 60296.8 |
| hypothetical protein | ED600_RS16575 | Not Available | Negative | 3379723 - 3380005 | 10281.4 |
| hth domain-containing protein | ED600_RS16585 | Not Available | Negative | 3380585 - 3380965 | 14277.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





