Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii oxidase subunit cbdx | ED600_RS16230 | Not Available | Positive | 3306376 - 3306468 | 3597.68 |
| appa family phytase/histidine-type acid phosphatase | ED600_RS16235 | Not Available | Positive | 3306548 - 3307846 | 47059.5 |
| tyrosine-protein kinase | ED600_RS16240 | Not Available | Negative | 3307961 - 3310141 | 81246.5 |
| protein-tyrosine-phosphatase etp | ED600_RS16245 | Not Available | Negative | 3310161 - 3310607 | 16386.9 |
| polysaccharide export protein | ED600_RS16250 | Not Available | Negative | 3310595 - 3311734 | 41743.2 |
| yjbh domain-containing protein | ED600_RS16255 | Not Available | Negative | 3311780 - 3313876 | 78720.3 |
| capsule biosynthesis gfcc family protein | ED600_RS16260 | Not Available | Negative | 3313876 - 3314622 | 27329.7 |
| lipoprotein gfcb | ED600_RS16265 | Not Available | Negative | 3314619 - 3315263 | 24268.9 |
| threonine-rich inner membrane protein gfca | ED600_RS16270 | Not Available | Negative | 3315370 - 3315675 | 9508.04 |
| cold shock-like protein csph | ED600_RS16275 | Not Available | Negative | 3316117 - 3316329 | 7720.48 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





