Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector espk | ED600_RS16175 | Not Available | Negative | 3295583 - 3296944 | 50733.8 |
| tail fiber assembly protein | ED600_RS16180 | Not Available | Positive | 3297321 - 3297473 | 5775.66 |
| Trna-ser | Not Available | Not Available | Positive | 3297555 - 3297642 | Not Available |
| hydrogenase 1 small subunit | ED600_RS16190 | Not Available | Positive | 3298069 - 3299187 | 40683.6 |
| ni/fe-hydrogenase large subunit | ED600_RS16195 | Not Available | Positive | 3299184 - 3300977 | 66257.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | ED600_RS16200 | Not Available | Positive | 3300996 - 3301703 | 27628.9 |
| hydrogenase 1 maturation protease | ED600_RS16205 | Not Available | Positive | 3301700 - 3302287 | 21547.7 |
| hydrogenase-1 operon protein hyae | ED600_RS16210 | Not Available | Positive | 3302284 - 3302682 | 14876.6 |
| hydrogenase expression/formation protein | ED600_RS16215 | Not Available | Positive | 3302679 - 3303536 | 31432.5 |
| cytochrome d ubiquinol oxidase subunit ii | ED600_RS16225 | Not Available | Positive | 3305227 - 3306363 | 42456.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





