Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence element accessory protein tnpb | ED600_RS15345 | Not Available | Positive | 3109524 - 3109874 | 13230.2 |
| transposase | ED600_RS15355 | Not Available | Positive | 3111264 - 3111426 | 5789.99 |
| duf1175 domain-containing protein | ED600_RS15360 | Not Available | Negative | 3111447 - 3112052 | 22933.8 |
| duf2138 domain-containing protein | ED600_RS15365 | Not Available | Negative | 3112049 - 3113737 | 62614.7 |
| dna topoisomerase (atp-hydrolyzing) subunit a | ED600_RS15370 | Not Available | Negative | 3113886 - 3116513 | 96969.3 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | ED600_RS15375 | Not Available | Positive | 3116660 - 3117382 | 26587.0 |
| ribonucleoside-diphosphate reductase subunit alpha | ED600_RS15385 | Not Available | Positive | 3121940 - 3124225 | 85723.9 |
| ribonucleotide-diphosphate reductase subunit beta | ED600_RS15390 | Not Available | Positive | 3124314 - 3125444 | 43503.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | ED600_RS15395 | Not Available | Positive | 3125444 - 3125698 | 9293.29 |
| lipopolysaccharide kinase inaa | ED600_RS15400 | Not Available | Negative | 3125752 - 3126402 | 25297.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





