Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator alls | ED600_RS13885 | Not Available | Positive | 2813023 - 2813949 | 34513.6 |
| trna 2-selenouridine(34) synthase mnmh | ED600_RS13890 | Not Available | Positive | 2814018 - 2815112 | 41132.2 |
| fumarate hydratase fumd | ED600_RS13910 | Not Available | Negative | 2817498 - 2817707 | 7907.85 |
| pyruvate kinase i | ED600_RS13915 | Not Available | Positive | 2818264 - 2819676 | 50732.5 |
| major outer membrane lipoprotein | ED600_RS13920 | Not Available | Positive | 2819987 - 2820223 | 8323.95 |
| l,d-transpeptidase ldte | ED600_RS13925 | Not Available | Negative | 2820287 - 2821291 | 36056.4 |
| cysteine desulfuration protein sufe | ED600_RS13930 | Not Available | Negative | 2821440 - 2821856 | 15801.2 |
| cysteine desulfurase sufs | ED600_RS13935 | Not Available | Negative | 2821869 - 2823089 | 44424.3 |
| fe-s cluster assembly protein sufd | ED600_RS13940 | Not Available | Negative | 2823086 - 2824357 | 46763.3 |
| fe-s cluster assembly atpase sufc | ED600_RS13945 | Not Available | Negative | 2824332 - 2825078 | 27587.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





