Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1076 domain-containing protein | ED600_RS13560 | Not Available | Negative | 2763143 - 2763784 | 24098.2 |
| Trna-arg | Not Available | Not Available | Positive | 2780588 - 2780664 | Not Available |
| fimbriae biosynthesis transcriptional regulator fimz | ED600_RS13735 | Not Available | Positive | 2780907 - 2781539 | 23664.9 |
| fimbria assembly protein | ED600_RS13740 | Not Available | Negative | 2781542 - 2782057 | 18221.7 |
| type 1 fimbrin d-mannose specific adhesin fimh | ED600_RS13745 | Not Available | Negative | 2782068 - 2783108 | 37986.7 |
| fimbrial biogenesis usher protein | ED600_RS13750 | Not Available | Negative | 2783087 - 2785696 | 96217.8 |
| type 1 fimbria chaperone fimc | ED600_RS13755 | Not Available | Negative | 2785727 - 2786419 | 25475.2 |
| type 1 fimbrial protein subunit fima | ED600_RS13760 | Not Available | Negative | 2786639 - 2787181 | 18475.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | ED600_RS13765 | Not Available | Positive | 2787662 - 2788528 | 31015.6 |
| ribosome-associated protein ybcj | ED600_RS13770 | Not Available | Positive | 2788530 - 2788742 | 7389.95 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





