Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase | ED600_RS13205 | Not Available | Negative | 2673932 - 2675215 | 47611.9 |
| cytosine permease | ED600_RS13210 | Not Available | Negative | 2675205 - 2676464 | 43680.4 |
| propionate--coa ligase | ED600_RS13215 | Not Available | Negative | 2676803 - 2678689 | 69439.8 |
| 2-methylcitrate dehydratase | ED600_RS13220 | Not Available | Negative | 2678729 - 2680180 | 53984.8 |
| 2-methylcitrate synthase | ED600_RS13225 | Not Available | Negative | 2680214 - 2681383 | 43161.6 |
| methylisocitrate lyase | ED600_RS13230 | Not Available | Negative | 2681428 - 2682318 | 32091.5 |
| propionate catabolism operon regulatory protein prpr | ED600_RS13235 | Not Available | Positive | 2682557 - 2684143 | 58600.9 |
| duf1471 domain-containing protein | ED600_RS13240 | Not Available | Negative | 2684241 - 2684516 | 9895.93 |
| lyse family transporter | ED600_RS13245 | Not Available | Positive | 2684663 - 2685334 | 24826.9 |
| Trna-pseudo | Not Available | Not Available | Positive | 2685586 - 2685666 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





