Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ED600_RS12385 | Not Available | Positive | 2513963 - 2514334 | 13528.3 |
| flagellar type iii secretion system pore protein flip | ED600_RS12390 | Not Available | Positive | 2514331 - 2515083 | 27167.9 |
| flagellar type iii secretion system protein fliq | ED600_RS12395 | Not Available | Positive | 2515086 - 2515358 | 9698.55 |
| flagellar biosynthetic protein flir | ED600_RS12400 | Not Available | Positive | 2515360 - 2516142 | 28707.3 |
| flagellar type iii secretion system protein flhb | ED600_RS12405 | Not Available | Positive | 2516132 - 2517271 | 42795.6 |
| flagellar type iii secretion system protein flha | ED600_RS12410 | Not Available | Positive | 2517255 - 2519348 | 75704.5 |
| type ii toxin-antitoxin system hica family toxin | ED600_RS12415 | Not Available | Positive | 2519453 - 2519731 | 10187.3 |
| type ii toxin-antitoxin system hicb family antitoxin | ED600_RS12420 | Not Available | Positive | 2519724 - 2520080 | 13400.8 |
| c40 family peptidase | ED600_RS12425 | Not Available | Negative | 2520137 - 2520910 | 29708.5 |
| type ii toxin-antitoxin system antitoxin dinj | ED600_RS12430 | Not Available | Positive | 2521096 - 2521356 | 9392.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





