Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose operon transcriptional regulator arac | ED600_RS11930 | Not Available | Negative | 2417261 - 2418139 | 33411.8 |
| ribulokinase | ED600_RS11935 | Not Available | Positive | 2418478 - 2420178 | 61115.7 |
| l-arabinose isomerase | ED600_RS11940 | Not Available | Positive | 2420189 - 2421691 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | ED600_RS11945 | Not Available | Positive | 2421860 - 2422555 | 25520.3 |
| dna polymerase ii | ED600_RS11950 | Not Available | Positive | 2422630 - 2424981 | 90056.6 |
| rna polymerase-associated protein rapa | ED600_RS11955 | Not Available | Positive | 2425146 - 2428052 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | ED600_RS11960 | Not Available | Positive | 2428064 - 2428723 | 24890.1 |
| co-chaperone djla | ED600_RS11965 | Not Available | Negative | 2428840 - 2429655 | 30567.2 |
| lps assembly protein lptd | ED600_RS11970 | Not Available | Positive | 2429910 - 2432264 | 89675.8 |
| peptidylprolyl isomerase sura | ED600_RS11975 | Not Available | Positive | 2432317 - 2433603 | 47286.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





