Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoe | ED600_RS07770 | Not Available | Negative | 1598713 - 1599288 | 21697.0 |
| rpoe leader peptide rsed | ED600_RS07775 | Not Available | Negative | 1599285 - 1599440 | 6229.83 |
| l-aspartate oxidase | ED600_RS07780 | Not Available | Positive | 1599696 - 1601318 | 60206.7 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | ED600_RS07785 | Not Available | Negative | 1601303 - 1602040 | 27209.4 |
| atp-dependent rna helicase srmb | ED600_RS07790 | Not Available | Positive | 1602172 - 1603506 | 49901.0 |
| cytochrome b562 | ED600_RS07795 | Not Available | Negative | 1603573 - 1603652 | 2727.35 |
| metalloprotease pmba | ED600_RS07800 | Not Available | Negative | 1603835 - 1605187 | 48372.4 |
| ribosome-associated protein | ED600_RS07805 | Not Available | Positive | 1605281 - 1605832 | 21400.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | ED600_RS07810 | Not Available | Negative | 1605988 - 1607361 | 49882.0 |
| class 1 fructose-bisphosphatase | ED600_RS07815 | Not Available | Positive | 1607537 - 1608535 | 36836.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





