Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019399 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1396240 bp
Thymine Count
1379401 bp
Guanine Count
1401953 bp
Cytosine Count
1433963 bp
Genome Length
5630312 bp
Protein-coding Genes
5184 genes
Non-Coding Genes
447 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1187 family protein | ED600_RS03925 | Not Available | Positive | 803186 - 803374 | 7045.5 |
| excisionase xisr | ED600_RS03930 | Not Available | Positive | 803474 - 803689 | 8456.25 |
| site-specific integrase | ED600_RS03935 | Not Available | Positive | 803691 - 804926 | 47575.8 |
| trna 2-thiocytidine(32) synthetase ttca | ED600_RS03940 | Not Available | Positive | 804978 - 805913 | 35516.9 |
| atp-dependent rna helicase dbpa | ED600_RS03945 | Not Available | Negative | 806042 - 807415 | 49214.7 |
| zinc transporter zntb | ED600_RS03950 | Not Available | Negative | 807893 - 808876 | 36614.3 |
| diguanylate cyclase dgcm | ED600_RS03955 | Not Available | Positive | 809131 - 810363 | 46483.9 |
| dna endonuclease smra | ED600_RS03960 | Not Available | Negative | 810384 - 810947 | 21563.8 |
| lysr family transcriptional regulator | ED600_RS03965 | Not Available | Negative | 811277 - 812185 | 34059.2 |
| m20 family metallo-hydrolase | ED600_RS03970 | Not Available | Positive | 812361 - 813671 | 46584.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





