Escherichia coli strain PNUSAE019399

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain PNUSAE019399 is a Gram-negative, rod-shaped bacterium typically found in pairs or as single cells. This strain is a facultative anaerobe, indicating its ability to thrive in both the presence and absence of oxygen, a trait that enhances its adaptability within various environments. The optimal growth temperature for strain PNUSAE019399 is approximately 37.0°C, aligning closely with the physiological temperature of warm-blooded hosts, which suggests a potential association with mammalian hosts. The habitat of this strain is defined as host-associated, indicating a likely symbiotic or commensal relationship with its host organisms. As a member of the Enterobacteriaceae family, E. coli strains are commonly found in the intestines of humans and other animals, where they play significant roles in digestion and nutrient absorption. The facultative anaerobic nature of strain PNUSAE019399 may facilitate its survival in diverse microenvironments within the host, ranging from oxygen-rich intestinal lumens to more anaerobic environments in deeper intestinal niches. The adaptability of this strain to varying oxygen levels and its presence in specific host-associated habitats may provide insights into its metabolic versatility and potential roles in microbial community dynamics. Understanding these traits can contribute to elucidating the ecological functions of E. coli strains within their hosts, particularly in relation to nutrient cycling and microbial interactions in the gastrointestinal tract.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain PNUSAE019399
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain PNUSAE019399

Accession NumberRNIM00000000.2

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5184 genes

Non-Coding Genes

447 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+601848 - 601873Not Available
Putative major head protein/prohead proteaseED600_RS02930Not Available-602141 - 60306433206.1
Phage terminase, small subunitED600_RS02935Not Available-603227 - 60371517842.8
antitermination protein nusgED600_RS02940Not Available-603843 - 6040045870.1
hypothetical proteinED600_RS02945Not Available-604008 - 6042027235.88
hypothetical proteinED600_RS02950Not Available-604333 - 6045788953.66
Gp56ED600_RS02955Not Available-604780 - 60618051994.0
duf4222 domain-containing proteinED600_RS02960Not Available-606177 - 60647611285.7
hypothetical proteinED600_RS02965Not Available-606482 - 6067159120.76
hypothetical proteinED600_RS02970Not Available-606717 - 6069388163.43

Displaying genes 1 – 10 of 5636 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites