Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019755 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1352102 bp
Thymine Count
1326421 bp
Guanine Count
1338772 bp
Cytosine Count
1368745 bp
Genome Length
5402925 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
252 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf977 family protein | ED607_RS23950 | Not Available | Positive | 4918038 - 4918451 | 15870.3 |
| rhs repeat protein | ED607_RS24010 | Not Available | Negative | 4926701 - 4930924 | 157214.0 |
| type vi secretion system tip protein vgrg | ED607_RS24015 | Not Available | Negative | 4931000 - 4933141 | 79617.0 |
| hcp family type vi secretion system effector | ED607_RS24020 | Not Available | Negative | 4933351 - 4933869 | 19256.8 |
| duf2713 family protein | ED607_RS24025 | Not Available | Positive | 4934345 - 4935052 | 26603.3 |
| pp_04732 | ED607_RS24030 | Not Available | Positive | 4935414 - 4935536 | Not Available |
| hypothetical protein | ED607_RS24035 | Not Available | Positive | 4935665 - 4936198 | 20142.5 |
| pyocin activator protein prtn | ED607_RS24040 | Not Available | Negative | 4936616 - 4936897 | 10727.9 |
| hypothetical protein | ED607_RS24050 | Not Available | Negative | 4937242 - 4937439 | 7276.08 |
| class i sam-dependent methyltransferase | ED607_RS24055 | Not Available | Negative | 4937775 - 4938059 | 10782.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





