Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019755 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1352102 bp
Thymine Count
1326421 bp
Guanine Count
1338772 bp
Cytosine Count
1368745 bp
Genome Length
5402925 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
252 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | ED607_RS20690 | Not Available | Positive | 4342213 - 4342713 | 18070.5 |
| hypothetical protein | ED607_RS20695 | Not Available | Positive | 4342748 - 4342972 | 8411.01 |
| type vi secretion system contractile sheath large subunit | ED607_RS20700 | Not Available | Positive | 4343023 - 4344414 | 52563.2 |
| type vi secretion system baseplate subunit tsse | ED607_RS20705 | Not Available | Positive | 4344505 - 4344918 | 15510.1 |
| type vi secretion system baseplate subunit tssf | ED607_RS20710 | Not Available | Positive | 4344922 - 4346772 | 71190.0 |
| type vi secretion system baseplate subunit tssg | ED607_RS20715 | Not Available | Positive | 4346736 - 4347818 | 40232.0 |
| type vi secretion system-associated fha domain protein tagh | ED607_RS20720 | Not Available | Positive | 4347843 - 4349123 | 47363.7 |
| type vi secretion system lipoprotein tssj | ED607_RS20725 | Not Available | Positive | 4349120 - 4349644 | 19424.0 |
| type vi secretion system baseplate subunit tssk | ED607_RS20730 | Not Available | Positive | 4349647 - 4350978 | 50002.8 |
| dotu family type iv/vi secretion system protein | ED607_RS20735 | Not Available | Positive | 4350983 - 4351744 | 29371.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





