Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019755 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1352102 bp
Thymine Count
1326421 bp
Guanine Count
1338772 bp
Cytosine Count
1368745 bp
Genome Length
5402925 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
252 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter atp-binding protein thiq | ED607_RS13640 | Not Available | Positive | 2882099 - 2882797 | 25026.7 |
| deda family protein | ED607_RS13645 | Not Available | Negative | 2882884 - 2883648 | 28199.7 |
| arabinose operon transcriptional regulator arac | ED607_RS13650 | Not Available | Negative | 2883734 - 2884612 | 33385.8 |
| ribulokinase | ED607_RS13655 | Not Available | Positive | 2884951 - 2886651 | 61230.8 |
| l-arabinose isomerase | ED607_RS13660 | Not Available | Positive | 2886662 - 2888164 | 56092.2 |
| l-ribulose-5-phosphate 4-epimerase | ED607_RS13665 | Not Available | Positive | 2888364 - 2889059 | 25504.3 |
| dna polymerase ii | ED607_RS13670 | Not Available | Positive | 2889134 - 2891485 | 90145.8 |
| rna polymerase-associated protein rapa | ED607_RS13675 | Not Available | Positive | 2891649 - 2894555 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | ED607_RS13680 | Not Available | Positive | 2894567 - 2895226 | 24862.1 |
| udp pyrophosphate phosphatase | ED607_RS13690 | Not Available | Negative | 2895644 - 2896396 | 28097.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





