Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019755 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1352102 bp
Thymine Count
1326421 bp
Guanine Count
1338772 bp
Cytosine Count
1368745 bp
Genome Length
5402925 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
252 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | ED607_RS11955 | Not Available | Positive | 2502581 - 2503612 | 38732.0 |
| nicotinate-nucleotide adenylyltransferase | ED607_RS11960 | Not Available | Positive | 2503614 - 2504255 | 24515.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | ED607_RS11965 | Not Available | Positive | 2504279 - 2504890 | 23386.8 |
| ribosome silencing factor | ED607_RS11970 | Not Available | Positive | 2505150 - 2505467 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | ED607_RS11975 | Not Available | Positive | 2505471 - 2505938 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | ED607_RS11980 | Not Available | Positive | 2505969 - 2507870 | 70860.6 |
| peptidoglycan glycosyltransferase mrdb | ED607_RS11985 | Not Available | Positive | 2507873 - 2508985 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | ED607_RS11990 | Not Available | Positive | 2508996 - 2510084 | 37555.1 |
| d-alanyl-d-alanine carboxypeptidase daca | ED607_RS11995 | Not Available | Positive | 2510224 - 2511435 | 44446.5 |
| ybed family protein | ED607_RS12000 | Not Available | Positive | 2511545 - 2511808 | 9827.92 |
Pathways
488 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





