Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Salmonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Salmonella |
| Species | Salmonella enterica |
| Strain | strain PNUSAS059842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1102124 bp
Thymine Count
1091004 bp
Guanine Count
1144939 bp
Cytosine Count
1174779 bp
Genome Length
4515926 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion systems effector ssef | EEM01_02990 | Not Available | Positive | 589059 - 589847 | 27389.2 |
| pathogenicity island 2 effector protein sseg | EEM01_02995 | Not Available | Positive | 589844 - 590536 | 24577.4 |
| type iii secretion system needle protein ssag | EEM01_03000 | Not Available | Positive | 590633 - 590848 | 7996.9 |
| escg/yscg/ssah family type iii secretion system needle protein co-chaperone | EEM01_03005 | Not Available | Positive | 590826 - 591116 | 10465.2 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | EEM01_03010 | Not Available | Positive | 591140 - 591388 | 9073.88 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein ssaj | EEM01_03015 | Not Available | Positive | 591385 - 592134 | 28612.3 |
| cytoplasmic protein | EEM01_03020 | Not Available | Positive | 592131 - 592700 | 22209.1 |
| type iii secretion system apparatus protein ssak | EEM01_03025 | Not Available | Positive | 592697 - 593371 | 26318.3 |
| sepl/tyea/hrpj family type iii secretion system protein | EEM01_03030 | Not Available | Positive | 593361 - 594353 | 38142.4 |
| type iii secretion system apparatus protein | EEM01_03035 | Not Available | Positive | 594411 - 594779 | 14428.5 |
Pathways
1196 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gastroenteritis | Causes | PMC12502522 |
| Diarrhea | Causes | PMC12502522 |
| Gastroenteritis | Causes | PMC5109407 |
| Food poisoning | Causes | PMC5109407 |
| Salmonellosis | Causes | PMC6516042 |
| Acute gastroenteritis | Causes | PMC6516042 |
| Intestinal inflammation | Causes | PMC6516042 |
| Gallbladder empyema | Causes | PMC10442058 |
| Disseminated disease | Causes | PMC10442058 |
| Gastroenteritis | Causes | PMC10442058 |




