Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019581 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1344221 bp
Thymine Count
1325747 bp
Guanine Count
1329181 bp
Cytosine Count
1365012 bp
Genome Length
5374776 bp
Protein-coding Genes
4908 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee effector map (rho guanine exchange factor) | EB515_RS14570 | Not Available | Positive | 3110622 - 3111233 | 22925.3 |
| type iii secretion system lee translocated intimin receptor tir | EB515_RS14575 | Not Available | Positive | 3111657 - 3113333 | 58025.8 |
| type iii secretion system lee chaperone cest | EB515_RS14580 | Not Available | Positive | 3113471 - 3113941 | 17681.9 |
| intimin type gamma | EB515_RS14585 | Not Available | Positive | 3114001 - 3116805 | 101841.0 |
| type iii secretion system lee inner membrane ring protein escd | EB515_RS14590 | Not Available | Negative | 3117069 - 3118289 | 45261.8 |
| type iii secretion system lee gatekeeper sepl | EB515_RS14595 | Not Available | Positive | 3118432 - 3119487 | 39954.0 |
| type iii secretion system lee translocon filament protein espa | EB515_RS14600 | Not Available | Positive | 3119546 - 3120124 | 20575.2 |
| type iii secretion system lee translocon pore-forming subunit espd | EB515_RS14605 | Not Available | Positive | 3120137 - 3121261 | 39085.5 |
| type iii secretion system lee translocon pore-forming subunit espb | EB515_RS14610 | Not Available | Positive | 3121282 - 3122220 | 32632.4 |
| type iii secretion system lee chaperone cesd2 | EB515_RS14615 | Not Available | Positive | 3122227 - 3122634 | 15813.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





