Pseudaminobacter arsenicus strain CB3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Borborobacter

Description

Pseudaminobacter arsenicus strain CB3 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication behavior. The genome of this strain is recorded under the accession number RKST00000000.1, providing a reference point for genomic studies and analyses. The classification within the genus Pseudaminobacter suggests that this strain may possess unique metabolic capabilities and adaptations, potentially allowing it to thrive in specific ecological niches. The presence of a single replicon could imply a streamlined genetic framework, which may enhance its efficiency in resource utilization and environmental adaptability. Studying Pseudaminobacter arsenicus strain CB3 could provide insights into the ecological roles of bacteria that can interact with arsenic, a toxic element. Understanding its metabolism and environmental interactions can contribute to our knowledge of bioremediation processes, where such bacteria may play a role in the detoxification of arsenic-contaminated environments. The exploration of this strain's genetics and ecological behavior may offer valuable perspectives on microbial life in extreme environments and the potential applications of such organisms in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusBorborobacter
SpeciesBorborobacter arsenicus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudaminobacter arsenicus strain CB3 contig120, whole genome

Gene Summary

Adenine Count

1007989 bp

Thymine Count

1004640 bp

Guanine Count

1600237 bp

Cytosine Count

1602873 bp

Genome Length

5224320 bp

Protein-coding Genes

4774 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette domain-containing proteinEET67_19750Not AvailableNegative4121957 - 412342651869.1
high-affinity branched-chain amino acid abc transporter permease livmEET67_19755Not AvailableNegative4123426 - 412481451053.8
branched-chain amino acid abc transporter permease livhEET67_19760Not AvailableNegative4124819 - 412572132203.7
4-hydroxyproline epimeraseEET67_19765Not AvailableNegative4126042 - 412704336624.0
fad-binding oxidoreductaseEET67_19770Not AvailableNegative4127057 - 412831345253.7
dihydrodipicolinate synthase family proteinEET67_19775Not AvailableNegative4128351 - 412924432186.0
gntr family transcriptional regulatorEET67_19780Not AvailablePositive4129330 - 413002224836.8
hypothetical proteinEET67_19785Not AvailableNegative4130086 - 413039711001.5
coa-acylating methylmalonate-semialdehyde dehydrogenaseEET67_19790Not AvailableNegative4130767 - 413226353326.1
lysr family transcriptional regulatorEET67_19795Not AvailablePositive4132421 - 413330232198.0

Displaying genes 3911 – 3920 of 4943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.