Abyssicoccus albus strain DSM 29158

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Abyssicoccaceae

Genus

Abyssicoccus

Description

Abyssicoccus albus strain DSM 29158 is a notable bacterium characterized by possessing a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RKRK00000000.1, which provides a unique identifier for its genomic data. The singular replicon suggests that Abyssicoccus albus has a simplified genetic organization, which can be advantageous for its survival and reproduction in marine environments, particularly in extreme conditions. Such organisms often exhibit specialized metabolic pathways that allow them to thrive in specific niches, potentially utilizing unique substrates or engaging in symbiotic relationships with other microorganisms. Understanding the genomic characteristics of Abyssicoccus albus, particularly its single replicon, could provide insights into its ecological role within marine ecosystems. This bacterium may participate in nutrient cycling or influence community dynamics in its habitat. Further research into its metabolic capabilities and interactions with other microorganisms could reveal its significance in maintaining the balance of microbial life in deep-sea environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAbyssicoccaceae
GenusAbyssicoccus
SpeciesAbyssicoccus albus
Strainstrain DSM 29158

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Abyssicoccus albus strain DSM 29158 Ga0244709_109, whole genome

Gene Summary

Adenine Count

582746 bp

Thymine Count

599755 bp

Guanine Count

296069 bp

Cytosine Count

317583 bp

Genome Length

1796951 bp

Protein-coding Genes

1689 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate ferredoxin oxidoreductase subunit alphaEDD62_0529Not AvailablePositive542230 - 54395764092.8
2-oxoglutarate ferredoxin oxidoreductase subunit betaEDD62_0530Not AvailablePositive543957 - 54482331358.1
uncharacterized protein yqgv (upf0045/duf77 family)EDD62_0531Not AvailablePositive544912 - 54521111346.6
energy-coupling factor transport system substrate-specific componentEDD62_0532Not AvailablePositive545490 - 54607421551.0
energy-coupling factor transport system atp-binding proteinEDD62_0533Not AvailablePositive546088 - 54749753707.2
energy-coupling factor transport system permease proteinEDD62_0534Not AvailablePositive547490 - 54828131095.5
pp_00511EDD62_0535Not AvailablePositive548358 - 549893Not Available
cell fate (sporulation/competence/biofilm development) regulator ymca (yhea/ymca/duf963 family)EDD62_0536Not AvailablePositive549893 - 55031215685.6
dna mismatch repair protein mutsEDD62_0537Not AvailablePositive550588 - 553233101587.0
dna mismatch repair protein mutlEDD62_0538Not AvailablePositive553435 - 55546277606.4

Displaying genes 601 – 610 of 1800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.