Abyssicoccus albus strain DSM 29158

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Abyssicoccaceae

Genus

Abyssicoccus

Description

Abyssicoccus albus strain DSM 29158 is a notable bacterium characterized by possessing a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RKRK00000000.1, which provides a unique identifier for its genomic data. The singular replicon suggests that Abyssicoccus albus has a simplified genetic organization, which can be advantageous for its survival and reproduction in marine environments, particularly in extreme conditions. Such organisms often exhibit specialized metabolic pathways that allow them to thrive in specific niches, potentially utilizing unique substrates or engaging in symbiotic relationships with other microorganisms. Understanding the genomic characteristics of Abyssicoccus albus, particularly its single replicon, could provide insights into its ecological role within marine ecosystems. This bacterium may participate in nutrient cycling or influence community dynamics in its habitat. Further research into its metabolic capabilities and interactions with other microorganisms could reveal its significance in maintaining the balance of microbial life in deep-sea environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAbyssicoccaceae
GenusAbyssicoccus
SpeciesAbyssicoccus albus
Strainstrain DSM 29158

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Abyssicoccus albus strain DSM 29158 Ga0244709_109, whole genome

Gene Summary

Adenine Count

582746 bp

Thymine Count

599755 bp

Guanine Count

296069 bp

Cytosine Count

317583 bp

Genome Length

1796951 bp

Protein-coding Genes

1689 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
redox-sensing transcriptional repressorEDD62_1561Not AvailableNegative1539257 - 153988623743.8
atp-binding cassette subfamily f protein 3EDD62_1562Not AvailablePositive1540043 - 154195973656.4
beta-lactamase family proteinEDD62_1563Not AvailableNegative1542307 - 154353948015.9
carbohydrate abc transporter substrate-binding protein (cut1 family)EDD62_1564Not AvailableNegative1543560 - 154490950209.4
carbohydrate abc transporter membrane protein 2 (cut1 family)EDD62_1565Not AvailableNegative1545026 - 154584730702.8
carbohydrate abc transporter membrane protein 1 (cut1 family)EDD62_1566Not AvailableNegative1545860 - 154672933287.0
multiple sugar transport system atp-binding proteinEDD62_1567Not AvailableNegative1546716 - 154776839445.8
o-sialoglycoprotein endopeptidaseEDD62_1568Not AvailableNegative1548097 - 154912237222.3
ribosomal-protein-alanine n-acetyltransferaseEDD62_1569Not AvailableNegative1549122 - 154957417330.9
trna threonylcarbamoyl adenosine modification protein yeazEDD62_1570Not AvailableNegative1549550 - 155020324962.9

Displaying genes 1601 – 1610 of 1800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.