Abyssicoccus albus strain DSM 29158

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Abyssicoccaceae

Genus

Abyssicoccus

Description

Abyssicoccus albus strain DSM 29158 is a notable bacterium characterized by possessing a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RKRK00000000.1, which provides a unique identifier for its genomic data. The singular replicon suggests that Abyssicoccus albus has a simplified genetic organization, which can be advantageous for its survival and reproduction in marine environments, particularly in extreme conditions. Such organisms often exhibit specialized metabolic pathways that allow them to thrive in specific niches, potentially utilizing unique substrates or engaging in symbiotic relationships with other microorganisms. Understanding the genomic characteristics of Abyssicoccus albus, particularly its single replicon, could provide insights into its ecological role within marine ecosystems. This bacterium may participate in nutrient cycling or influence community dynamics in its habitat. Further research into its metabolic capabilities and interactions with other microorganisms could reveal its significance in maintaining the balance of microbial life in deep-sea environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAbyssicoccaceae
GenusAbyssicoccus
SpeciesAbyssicoccus albus
Strainstrain DSM 29158

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Abyssicoccus albus strain DSM 29158 Ga0244709_109, whole genome

Gene Summary

Adenine Count

582746 bp

Thymine Count

599755 bp

Guanine Count

296069 bp

Cytosine Count

317583 bp

Genome Length

1796951 bp

Protein-coding Genes

1689 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent exodnase (exonuclease v) beta subunitEDD62_1500Not AvailableNegative1467918 - 1473653222174.0
pd-(d/e)xk nuclease superfamily proteinEDD62_1501Not AvailableNegative1473643 - 1477866165730.0
hypothetical proteinEDD62_1502Not AvailableNegative1478051 - 147868324764.1
protein involved in sex pheromone biosynthesisEDD62_1503Not AvailableNegative1478925 - 148010945044.1
dna ligase (nad+)EDD62_1504Not AvailableNegative1480120 - 148210274702.8
atp-dependent dna helicase pcraEDD62_1505Not AvailableNegative1482102 - 148428884457.0
putative glycerol-1-phosphate prenyltransferaseEDD62_1506Not AvailableNegative1484328 - 148501425983.2
d-alanyl-d-alanine carboxypeptidaseEDD62_1507Not AvailableNegative1485057 - 148585730443.2
adenylosuccinate lyaseEDD62_1508Not AvailableNegative1486032 - 148732749632.2
phosphonate transport system permease proteinEDD62_1509Not AvailableNegative1487500 - 148830929774.5

Displaying genes 1541 – 1550 of 1800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.