Abyssicoccus albus strain DSM 29158

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Abyssicoccaceae

Genus

Abyssicoccus

Description

Abyssicoccus albus strain DSM 29158 is a notable bacterium characterized by possessing a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RKRK00000000.1, which provides a unique identifier for its genomic data. The singular replicon suggests that Abyssicoccus albus has a simplified genetic organization, which can be advantageous for its survival and reproduction in marine environments, particularly in extreme conditions. Such organisms often exhibit specialized metabolic pathways that allow them to thrive in specific niches, potentially utilizing unique substrates or engaging in symbiotic relationships with other microorganisms. Understanding the genomic characteristics of Abyssicoccus albus, particularly its single replicon, could provide insights into its ecological role within marine ecosystems. This bacterium may participate in nutrient cycling or influence community dynamics in its habitat. Further research into its metabolic capabilities and interactions with other microorganisms could reveal its significance in maintaining the balance of microbial life in deep-sea environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAbyssicoccaceae
GenusAbyssicoccus
SpeciesAbyssicoccus albus
Strainstrain DSM 29158

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Abyssicoccus albus strain DSM 29158 Ga0244709_109, whole genome

Gene Summary

Adenine Count

582746 bp

Thymine Count

599755 bp

Guanine Count

296069 bp

Cytosine Count

317583 bp

Genome Length

1796951 bp

Protein-coding Genes

1689 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter substrate-binding protein (cut1 family)EDD62_1635Not AvailableNegative1606645 - 160834563849.1
carbohydrate abc transporter membrane protein 1 (cut1 family)EDD62_1636Not AvailableNegative1608357 - 160933437173.4
hypothetical proteinEDD62_1637Not AvailableNegative1609331 - 161070752831.8
carbohydrate abc transporter atp-binding protein (cut1 family)EDD62_1638Not AvailableNegative1610707 - 161175940285.2
nucleoside-diphosphate-sugar epimeraseEDD62_1639Not AvailableNegative1611891 - 161283235557.5
2-amino-3-ketobutyrate coenzyme a ligaseEDD62_1640Not AvailableNegative1612860 - 161405042854.3
amidohydrolaseEDD62_1641Not AvailablePositive1614192 - 161537043498.5
nicotinamidase-related amidaseEDD62_1642Not AvailableNegative1615373 - 161592120955.8
translation elongation factor 1a (ef-1a/ef-tu)EDD62_1643Not AvailableNegative1616007 - 161719443108.2
translation elongation factor 2 (ef-2/ef-g)EDD62_1644Not AvailableNegative1617330 - 161941176444.7

Displaying genes 1671 – 1680 of 1800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.