Abyssicoccus albus strain DSM 29158

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Abyssicoccaceae

Genus

Abyssicoccus

Description

Abyssicoccus albus strain DSM 29158 is a notable bacterium characterized by possessing a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number RKRK00000000.1, which provides a unique identifier for its genomic data. The singular replicon suggests that Abyssicoccus albus has a simplified genetic organization, which can be advantageous for its survival and reproduction in marine environments, particularly in extreme conditions. Such organisms often exhibit specialized metabolic pathways that allow them to thrive in specific niches, potentially utilizing unique substrates or engaging in symbiotic relationships with other microorganisms. Understanding the genomic characteristics of Abyssicoccus albus, particularly its single replicon, could provide insights into its ecological role within marine ecosystems. This bacterium may participate in nutrient cycling or influence community dynamics in its habitat. Further research into its metabolic capabilities and interactions with other microorganisms could reveal its significance in maintaining the balance of microbial life in deep-sea environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAbyssicoccaceae
GenusAbyssicoccus
SpeciesAbyssicoccus albus
Strainstrain DSM 29158

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Abyssicoccus albus strain DSM 29158 Ga0244709_109, whole genome

Gene Summary

Adenine Count

582746 bp

Thymine Count

599755 bp

Guanine Count

296069 bp

Cytosine Count

317583 bp

Genome Length

1796951 bp

Protein-coding Genes

1689 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEDD62_1428Not AvailablePositive1396674 - 139720420905.7
23s rrna (adenine-n6)-dimethyltransferaseEDD62_1429Not AvailablePositive1397605 - 139834229069.4
lyttr family transcriptional regulatorEDD62_1430Not AvailablePositive1398822 - 139926217146.9
duf3021 family proteinEDD62_1431Not AvailablePositive1399259 - 139970817151.6
hypothetical proteinEDD62_1432Not AvailableNegative1399993 - 140052320867.2
two-component system response regulator protein brar/bcerEDD62_1433Not AvailablePositive1400815 - 140148926275.9
two-component system sensor histidine kinase bras/bcesEDD62_1434Not AvailablePositive1401491 - 140238734680.3
putative abc transport system atp-binding protein/bacitracin transport system atp-binding proteinEDD62_1435Not AvailablePositive1402493 - 140324227786.4
putative abc transport system permease protein/bacitracin transport system permease proteinEDD62_1436Not AvailablePositive1403242 - 140522776085.2
uncharacterized protein yndb with ahsa1/start domainEDD62_1437Not AvailablePositive1405261 - 140573118297.3

Displaying genes 1471 – 1480 of 1800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.