Pacificibacter maritimus strain DSM 104731

ovoid

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pacificibacter

Description

Pacificibacter maritimus strain DSM 104731 is a Gram-negative bacterium characterized by its ovoid shape. This strain features a single replicon, indicating a relatively straightforward genetic structure. The genomic data for this strain is cataloged under the accession number RKQK00000000.1. Given its classification within the genus Pacificibacter, this microorganism likely inhabits marine environments. Members of this genus are often involved in various ecological processes, including nutrient cycling and the degradation of organic matter in coastal ecosystems. The Gram-negative nature of Pacificibacter maritimus suggests it possesses a unique outer membrane structure that may contribute to its adaptability in marine habitats, potentially influencing its interactions with other microorganisms and the surrounding environment. The traits of Pacificibacter maritimus strain DSM 104731 highlight its potential role in marine microbiology, particularly in understanding the dynamics of microbial communities in oceanic systems. Its specific characteristics could offer insights into how such bacteria contribute to biogeochemical cycles and respond to environmental changes in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPacificibacter
SpeciesPacificibacter maritimus
Strainstrain DSM 104731

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificibacter maritimus strain DSM 104731 Ga0244735_18, whole

Gene Summary

Adenine Count

748037 bp

Thymine Count

740188 bp

Guanine Count

794513 bp

Cytosine Count

801591 bp

Genome Length

3084850 bp

Protein-coding Genes

2916 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfoxide reductase heme-binding subunit yedzEDD53_0060Not AvailableNegative77263 - 7786823009.5
cytochrome b561EDD53_0061Not AvailableNegative77943 - 7844318216.6
catechol 2,3-dioxygenaseEDD53_0062Not AvailableNegative78453 - 7934032199.4
doxx-like proteinEDD53_0063Not AvailableNegative79406 - 7983414652.6
lysr family transcriptional regulatorEDD53_0064Not AvailablePositive79950 - 8084932756.6
multidrug efflux system membrane fusion proteinEDD53_0065Not AvailablePositive81398 - 8262142507.6
multidrug efflux pumpEDD53_0066Not AvailablePositive82618 - 85737111640.0
Trna-cysNot AvailableNot AvailablePositive86208 - 86281Not Available
protein-l-isoaspartate(d-aspartate) o-methyltransferaseEDD53_0069Not AvailablePositive86612 - 8726522979.9
outer membrane proteinEDD53_0070Not AvailablePositive87317 - 8872048944.6

Displaying genes 81 – 90 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.