Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter maritimus |
| Strain | strain DSM 104731 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
748037 bp
Thymine Count
740188 bp
Guanine Count
794513 bp
Cytosine Count
801591 bp
Genome Length
3084850 bp
Protein-coding Genes
2916 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine oxidase | EDD53_0642 | Not Available | Negative | 678496 - 679476 | 35357.4 |
| hydroxymethylpyrimidine synthase | EDD53_0643 | Not Available | Negative | 679473 - 681281 | 66666.2 |
| 2fe-2s ferredoxin | EDD53_0644 | Not Available | Negative | 681873 - 682196 | 11344.4 |
| hypothetical protein | EDD53_0645 | Not Available | Negative | 682232 - 683407 | 44033.6 |
| dna-binding transcriptional lysr family regulator | EDD53_0646 | Not Available | Positive | 683519 - 684421 | 33421.8 |
| translation elongation factor ts (ef-ts) | EDD53_0647 | Not Available | Negative | 684709 - 685584 | 30083.3 |
| ssu ribosomal protein s2p | EDD53_0648 | Not Available | Negative | 685666 - 686424 | 27388.0 |
| sugar/nucleoside kinase (ribokinase family) | EDD53_0649 | Not Available | Positive | 686734 - 687627 | 31046.1 |
| pseudouridine-5'-phosphate glycosidase | EDD53_0650 | Not Available | Positive | 687624 - 688532 | 31564.1 |
| putative membrane protein | EDD53_0651 | Not Available | Positive | 688657 - 689397 | 26793.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
