Pacificibacter maritimus strain DSM 104731

ovoid

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pacificibacter

Description

Pacificibacter maritimus strain DSM 104731 is a Gram-negative bacterium characterized by its ovoid shape. This strain features a single replicon, indicating a relatively straightforward genetic structure. The genomic data for this strain is cataloged under the accession number RKQK00000000.1. Given its classification within the genus Pacificibacter, this microorganism likely inhabits marine environments. Members of this genus are often involved in various ecological processes, including nutrient cycling and the degradation of organic matter in coastal ecosystems. The Gram-negative nature of Pacificibacter maritimus suggests it possesses a unique outer membrane structure that may contribute to its adaptability in marine habitats, potentially influencing its interactions with other microorganisms and the surrounding environment. The traits of Pacificibacter maritimus strain DSM 104731 highlight its potential role in marine microbiology, particularly in understanding the dynamics of microbial communities in oceanic systems. Its specific characteristics could offer insights into how such bacteria contribute to biogeochemical cycles and respond to environmental changes in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPacificibacter
SpeciesPacificibacter maritimus
Strainstrain DSM 104731

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificibacter maritimus strain DSM 104731 Ga0244735_18, whole

Gene Summary

Adenine Count

748037 bp

Thymine Count

740188 bp

Guanine Count

794513 bp

Cytosine Count

801591 bp

Genome Length

3084850 bp

Protein-coding Genes

2916 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase subunit deltaEDD53_2565Not AvailableNegative2646227 - 264652911507.5
sarcosine oxidase subunit betaEDD53_2566Not AvailableNegative2646540 - 264779345526.1
dihydroxyacid dehydrataseEDD53_2567Not AvailableNegative2648021 - 264986865601.5
laci family transcriptional regulatorEDD53_2568Not AvailableNegative2649993 - 265104237578.6
Trna-argNot AvailableNot AvailablePositive2651316 - 2651392Not Available
uncharacterized protein glcg (duf336 family)EDD53_2571Not AvailablePositive2652529 - 265294813827.1
trap-type c4-dicarboxylate transport system permease small subunitEDD53_2572Not AvailablePositive2653166 - 265367218591.6
tripartite atp-independent transporter dctm subunitEDD53_2573Not AvailablePositive2653672 - 265495244908.2
tripartite atp-independent transporter dctp family solute receptorEDD53_2574Not AvailablePositive2654973 - 265595335626.4
2-hydroxy-3-oxopropionate reductaseEDD53_2575Not AvailablePositive2656197 - 265708130380.5

Displaying genes 2541 – 2550 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.