Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter maritimus |
| Strain | strain DSM 104731 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
748037 bp
Thymine Count
740188 bp
Guanine Count
794513 bp
Cytosine Count
801591 bp
Genome Length
3084850 bp
Protein-coding Genes
2916 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | EDD53_2555 | Not Available | Negative | 2632861 - 2634510 | 60418.5 |
| betaine aldehyde dehydrogenase | EDD53_2556 | Not Available | Negative | 2634522 - 2635973 | 51124.8 |
| choline-sulfatase | EDD53_2557 | Not Available | Negative | 2636006 - 2637514 | 56987.8 |
| tetr family transcriptional regulator | EDD53_2558 | Not Available | Negative | 2637511 - 2638101 | 22167.9 |
| glycine betaine/proline transport system substrate-binding protein | EDD53_2559 | Not Available | Positive | 2638180 - 2639100 | 32656.1 |
| glycine betaine/proline transport system permease protein | EDD53_2560 | Not Available | Positive | 2639247 - 2640080 | 30401.4 |
| glycine betaine/proline transport system atp-binding protein | EDD53_2561 | Not Available | Positive | 2640077 - 2641099 | 37055.8 |
| l-serine dehydratase | EDD53_2562 | Not Available | Negative | 2641188 - 2642597 | 49459.9 |
| sarcosine oxidase subunit gamma | EDD53_2563 | Not Available | Negative | 2642674 - 2643225 | 20031.0 |
| sarcosine oxidase subunit alpha | EDD53_2564 | Not Available | Negative | 2643222 - 2646230 | 109519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
