Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Pacificibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Pacificibacter |
| Species | Pacificibacter maritimus |
| Strain | strain DSM 104731 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
748037 bp
Thymine Count
740188 bp
Guanine Count
794513 bp
Cytosine Count
801591 bp
Genome Length
3084850 bp
Protein-coding Genes
2916 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secb | EDD53_2485 | Not Available | Negative | 2558585 - 2559082 | 18683.3 |
| upf0716 protein fxsa | EDD53_2486 | Not Available | Negative | 2559140 - 2559709 | 20636.3 |
| putative lipid-binding transport protein (tim44 family) | EDD53_2487 | Not Available | Positive | 2559741 - 2560400 | 24225.3 |
| membrane-bound lytic murein transglycosylase a | EDD53_2488 | Not Available | Positive | 2560397 - 2561440 | 38292.2 |
| dna-nicking smr family endonuclease | EDD53_2489 | Not Available | Positive | 2561437 - 2562045 | 22612.9 |
| sugar phosphate permease | EDD53_2490 | Not Available | Negative | 2562031 - 2563251 | 44088.1 |
| atp-dependent hsluv protease atp-binding subunit hslu | EDD53_2491 | Not Available | Negative | 2563323 - 2564627 | 48100.4 |
| hslv component of hsluv peptidase | EDD53_2492 | Not Available | Negative | 2564624 - 2565181 | 19542.5 |
| thioredoxin | EDD53_2493 | Not Available | Negative | 2565304 - 2565624 | 11351.6 |
| dna helicase/exodeoxyribonuclease v subunit a | EDD53_2494 | Not Available | Negative | 2565679 - 2569074 | 125564.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
