Pacificibacter maritimus strain DSM 104731

ovoid

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pacificibacter

Description

Pacificibacter maritimus strain DSM 104731 is a Gram-negative bacterium characterized by its ovoid shape. This strain features a single replicon, indicating a relatively straightforward genetic structure. The genomic data for this strain is cataloged under the accession number RKQK00000000.1. Given its classification within the genus Pacificibacter, this microorganism likely inhabits marine environments. Members of this genus are often involved in various ecological processes, including nutrient cycling and the degradation of organic matter in coastal ecosystems. The Gram-negative nature of Pacificibacter maritimus suggests it possesses a unique outer membrane structure that may contribute to its adaptability in marine habitats, potentially influencing its interactions with other microorganisms and the surrounding environment. The traits of Pacificibacter maritimus strain DSM 104731 highlight its potential role in marine microbiology, particularly in understanding the dynamics of microbial communities in oceanic systems. Its specific characteristics could offer insights into how such bacteria contribute to biogeochemical cycles and respond to environmental changes in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPacificibacter
SpeciesPacificibacter maritimus
Strainstrain DSM 104731

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificibacter maritimus strain DSM 104731 Ga0244735_18, whole

Gene Summary

Adenine Count

748037 bp

Thymine Count

740188 bp

Guanine Count

794513 bp

Cytosine Count

801591 bp

Genome Length

3084850 bp

Protein-coding Genes

2916 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyl-coa carboxylase biotin carboxylase subunitEDD53_2262Not AvailableNegative2335810 - 233718649106.8
biotin carboxyl carrier proteinEDD53_2263Not AvailableNegative2337183 - 233761715014.7
4-hydroxy-4-methyl-2-oxoglutarate aldolaseEDD53_2264Not AvailablePositive2337852 - 233852623638.5
gluconokinaseEDD53_2265Not AvailableNegative2338829 - 233933818760.2
gluconate 5-dehydrogenaseEDD53_2266Not AvailableNegative2339325 - 234011627674.1
lactate dehydrogenase-like 2-hydroxyacid dehydrogenaseEDD53_2267Not AvailablePositive2340256 - 234120634326.8
l-idonate 5-dehydrogenaseEDD53_2268Not AvailablePositive2341209 - 234224036280.1
6-phosphogluconate dehydrogenase (decarboxylating)EDD53_2269Not AvailablePositive2342270 - 234368250260.2
lysr family nitrogen assimilation transcriptional regulatorEDD53_2270Not AvailableNegative2343765 - 234467332550.1
trap-type c4-dicarboxylate transport system substrate-binding proteinEDD53_2271Not AvailablePositive2344902 - 234588235045.4

Displaying genes 2241 – 2250 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.