Pacificibacter maritimus strain DSM 104731

ovoid

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pacificibacter

Description

Pacificibacter maritimus strain DSM 104731 is a Gram-negative bacterium characterized by its ovoid shape. This strain features a single replicon, indicating a relatively straightforward genetic structure. The genomic data for this strain is cataloged under the accession number RKQK00000000.1. Given its classification within the genus Pacificibacter, this microorganism likely inhabits marine environments. Members of this genus are often involved in various ecological processes, including nutrient cycling and the degradation of organic matter in coastal ecosystems. The Gram-negative nature of Pacificibacter maritimus suggests it possesses a unique outer membrane structure that may contribute to its adaptability in marine habitats, potentially influencing its interactions with other microorganisms and the surrounding environment. The traits of Pacificibacter maritimus strain DSM 104731 highlight its potential role in marine microbiology, particularly in understanding the dynamics of microbial communities in oceanic systems. Its specific characteristics could offer insights into how such bacteria contribute to biogeochemical cycles and respond to environmental changes in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPacificibacter
SpeciesPacificibacter maritimus
Strainstrain DSM 104731

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificibacter maritimus strain DSM 104731 Ga0244735_18, whole

Gene Summary

Adenine Count

748037 bp

Thymine Count

740188 bp

Guanine Count

794513 bp

Cytosine Count

801591 bp

Genome Length

3084850 bp

Protein-coding Genes

2916 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome biogenesis gtpaseEDD53_2202Not AvailablePositive2269921 - 227096738423.6
dna polymerase-3 subunit gamma/tauEDD53_2203Not AvailablePositive2271052 - 227281863801.5
hypothetical proteinEDD53_2204Not AvailablePositive2272894 - 227323811993.6
dna replication and repair protein recrEDD53_2205Not AvailablePositive2273248 - 227384421030.6
hypothetical proteinEDD53_2206Not AvailableNegative2273904 - 227463826765.6
ribonuclease t2EDD53_2207Not AvailablePositive2274786 - 227542724025.2
nadph2:quinone reductaseEDD53_2208Not AvailableNegative2275460 - 227644934412.8
ubiquinone biosynthesis protein coq9EDD53_2209Not AvailableNegative2276446 - 227714725208.9
ssu ribosomal protein s21pEDD53_2210Not AvailablePositive2277257 - 22774638045.03
assimilatory nitrate reductase (nadh) alpha subunit apoproteinEDD53_2211Not AvailableNegative2277618 - 228023693092.2

Displaying genes 2181 – 2190 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.