Pacificibacter maritimus strain DSM 104731

ovoid

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pacificibacter

Description

Pacificibacter maritimus strain DSM 104731 is a Gram-negative bacterium characterized by its ovoid shape. This strain features a single replicon, indicating a relatively straightforward genetic structure. The genomic data for this strain is cataloged under the accession number RKQK00000000.1. Given its classification within the genus Pacificibacter, this microorganism likely inhabits marine environments. Members of this genus are often involved in various ecological processes, including nutrient cycling and the degradation of organic matter in coastal ecosystems. The Gram-negative nature of Pacificibacter maritimus suggests it possesses a unique outer membrane structure that may contribute to its adaptability in marine habitats, potentially influencing its interactions with other microorganisms and the surrounding environment. The traits of Pacificibacter maritimus strain DSM 104731 highlight its potential role in marine microbiology, particularly in understanding the dynamics of microbial communities in oceanic systems. Its specific characteristics could offer insights into how such bacteria contribute to biogeochemical cycles and respond to environmental changes in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPacificibacter
SpeciesPacificibacter maritimus
Strainstrain DSM 104731

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificibacter maritimus strain DSM 104731 Ga0244735_18, whole

Gene Summary

Adenine Count

748037 bp

Thymine Count

740188 bp

Guanine Count

794513 bp

Cytosine Count

801591 bp

Genome Length

3084850 bp

Protein-coding Genes

2916 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEDD53_1105Not AvailableNegative1164570 - 116509118996.9
putative sterol carrier proteinEDD53_1106Not AvailablePositive1165211 - 11655019851.57
lysophospholipaseEDD53_1107Not AvailablePositive1165596 - 116657335467.3
oligoendopeptidase fEDD53_1108Not AvailablePositive1166667 - 116852969634.1
5-methylcytosine-specific restriction protein aEDD53_1109Not AvailablePositive1168534 - 116910921686.8
uncharacterized protein duf4389EDD53_1110Not AvailableNegative1169120 - 116943711960.8
putative dehydrogenaseEDD53_1111Not AvailableNegative1169462 - 117044536281.0
rna polymerase rpoh-like sigma 32 subunitEDD53_1112Not AvailableNegative1170706 - 117160234082.4
ribosomal large subunit pseudouridine synthase dEDD53_1113Not AvailableNegative1171834 - 117287137320.1
hypothetical proteinEDD53_1114Not AvailablePositive1172930 - 117322010496.0

Displaying genes 1101 – 1110 of 2983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.