Yersinia pestis strain FDAARGOS_605 tig00000001_pilon

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia pestis strain FDAARGOS_605 (tig00000001_pilon) is a notable pathogenic bacterium primarily recognized as the causative agent of the plague, including its various forms such as bubonic, septicemic, and pneumonic plague. This organism is classified as a Gram-negative rod-shaped bacterium, known for its facultative anaerobic metabolism as a heterotroph, allowing it to thrive in diverse environments. Characteristically, Yersinia pestis is free-living and exhibits mobility due to the presence of flagella. It typically exists as single cells, demonstrating its adaptability in multiple habitats. The bacterium has a mesophilic temperature range, with an optimal growth temperature around 28°C, which may influence its ecology and interactions with hosts. The strain is capable of infecting a range of hosts, including Homo sapiens (humans), Siphonaptera (fleas), Metazoa (multicellular organisms), Mammalia (mammals), and even Caenorhabditis elegans (a model organism for biological studies). This broad host range underscores the ecological versatility and potential for transmission of Yersinia pestis. Given its historical significance, having contributed to epidemics such as the Justinianic plague and the Black Death, the understanding of Yersinia pestis strain FDAARGOS_605 is crucial for public health and epidemiology. Its pathogenic potential and relationship with various hosts illustrate the complex dynamics between microbial pathogens and their environments, emphasizing the importance of continued research in controlling and preventing plague outbreaks.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia pestis
Strainstrain FDAARGOS_605 tig00000001_pilon

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia pestis strain FDAARGOS_605 tig00000001_pilon
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Siphonaptera, Metazoa
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia pestis strain FDAARGOS_605 tig00000001_pilon, whole

Gene Summary

Adenine Count

1273981 bp

Thymine Count

1272816 bp

Guanine Count

1146636 bp

Cytosine Count

1170078 bp

Genome Length

4863748 bp

Protein-coding Genes

4223 genes

Non-Coding Genes

259 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative porphyrin biosynthetic proteinEGT45_00860Not AvailablePositive138550 - 14091686865.2
Putative porphyrin biosynthetic proteinEGT45_00865Not AvailablePositive141013 - 14224845376.6
Hypothetical proteinEGT45_00870Not AvailablePositive142251 - 1424547277.72
Dna polymerase iii alpha subunitEGT45_00875Not AvailablePositive142429 - 145470112273.0
TransposaseEGT45_00880Not AvailablePositive145556 - 14657839903.2
Transposase/is proteinEGT45_00885Not AvailablePositive146575 - 14735628829.1
Dna polymerase iii alpha subunitEGT45_00890Not AvailablePositive147372 - 14791120540.7
Hypothetical proteinEGT45_00895Not AvailablePositive147908 - 14835116668.3
Putative phage transcriptional regulator alpa-like proteinEGT45_00900Not AvailableNegative148381 - 14894420208.8
Hypothetical proteinEGT45_00905Not AvailableNegative149017 - 1492689443.22

Displaying genes 41 – 50 of 4487 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PlagueCausesPMC10229654
Bubonic plagueCausesPMC10229654
Septicaemic plagueCausesPMC10229654
Pneumonic plagueCausesPMC10229654
Justinianic plagueCausesPMC10229654
Black deathCausesPMC10229654
PlagueCausesPMC3047566
Black deathCausesPMC3216949
PlagueCausesPMC3216949
PlagueCausesPMC4644222

Displaying health effects 1 – 10 of 31 in total