Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--protein-cysteine methyltransferase | EGT48_01985 | Not Available | Negative | 317061 - 317576 | 19180.2 |
| arac family transcriptional regulator | EGT48_01995 | Not Available | Negative | 318119 - 318934 | 30556.3 |
| hlyd family secretion protein | EGT48_02000 | Not Available | Positive | 319031 - 320059 | 37749.3 |
| dha2 family efflux mfs transporter permease subunit | EGT48_02005 | Not Available | Positive | 320059 - 321570 | 55450.6 |
| dna endonuclease smra | EGT48_02010 | Not Available | Positive | 321765 - 322328 | 21573.8 |
| diguanylate cyclase | EGT48_02015 | Not Available | Negative | 322349 - 323581 | 46557.9 |
| zinc transporter zntb | EGT48_02020 | Not Available | Positive | 323836 - 324819 | 36614.3 |
| atp-dependent rna helicase dbpa | EGT48_02025 | Not Available | Positive | 325297 - 326670 | 49158.7 |
| trna 2-thiocytidine(32) synthetase ttca | EGT48_02030 | Not Available | Negative | 326798 - 327733 | 35489.9 |
| integrase | EGT48_02035 | Not Available | Negative | 327785 - 328036 | 9680.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





