Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(fmet)-specific endonuclease vapc | EGT48_01255 | Not Available | Negative | 186797 - 187195 | 14886.2 |
| antitoxin | EGT48_01260 | Not Available | Negative | 187195 - 187425 | 8681.29 |
| conjugative transfer relaxase/helicase trai | EGT48_01265 | Not Available | Positive | 187504 - 192774 | 191812.0 |
| is21-like element isec12 family transposase | EGT48_01275 | Not Available | Positive | 193050 - 194591 | 59359.5 |
| atp-binding protein | EGT48_01280 | Not Available | Positive | 194606 - 195352 | 28348.2 |
| type-f conjugative transfer system pilin acetylase trax | EGT48_01285 | Not Available | Positive | 195380 - 196126 | 27936.7 |
| fertility inhibition protein fino | EGT48_01290 | Not Available | Positive | 196181 - 196741 | 21148.7 |
| hypothetical protein | EGT48_01295 | Not Available | Positive | 196872 - 197081 | 8292.81 |
| hypothetical protein | EGT48_01300 | Not Available | Positive | 197493 - 198119 | 23904.8 |
| duf2726 domain-containing protein | EGT48_01305 | Not Available | Positive | 198271 - 198840 | 22167.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





