Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein traf | EGT48_01205 | Not Available | Positive | 176536 - 177279 | 28004.7 |
| conjugal transfer protein trba | EGT48_01210 | Not Available | Positive | 177295 - 177642 | 13000.6 |
| type-f conjugative transfer system pilin chaperone traq | EGT48_01215 | Not Available | Positive | 177761 - 178045 | 10965.5 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | EGT48_01220 | Not Available | Positive | 178032 - 178577 | 19804.0 |
| conjugal transfer protein trbj | EGT48_01225 | Not Available | Positive | 178507 - 178869 | 13365.5 |
| conjugal transfer protein trah | EGT48_01230 | Not Available | Positive | 178869 - 180242 | 50358.3 |
| conjugal transfer protein trag | EGT48_01235 | Not Available | Positive | 180239 - 183058 | 102816.0 |
| entry exclusion protein | EGT48_01240 | Not Available | Positive | 183077 - 183574 | 19070.3 |
| complement resistance protein trat | EGT48_01245 | Not Available | Positive | 183606 - 184337 | 25902.2 |
| type iv conjugative transfer system coupling protein trad | EGT48_01250 | Not Available | Positive | 184590 - 186788 | 83121.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





