Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trba | EGT48_00695 | Not Available | Positive | 100069 - 100407 | 12758.2 |
| type-f conjugative transfer system pilin chaperone traq | EGT48_00700 | Not Available | Positive | 100534 - 100818 | 10813.3 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | EGT48_00705 | Not Available | Positive | 100805 - 101350 | 20001.2 |
| conjugal transfer protein trbj | EGT48_00710 | Not Available | Positive | 101280 - 101621 | 12776.8 |
| conjugal transfer protein trbf | EGT48_00715 | Not Available | Positive | 101569 - 101994 | 17116.8 |
| is6 family transposase is15div | EGT48_00725 | Not Available | Positive | 102854 - 103558 | 27896.9 |
| duf1778 domain-containing protein | EGT48_00740 | Not Available | Positive | 107509 - 107766 | 9827.69 |
| gnat family n-acetyltransferase | EGT48_00745 | Not Available | Positive | 107770 - 108300 | 20322.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | EGT48_00760 | Not Available | Negative | 108887 - 109117 | 8857.45 |
| histidinol-phosphatase | EGT48_00765 | Not Available | Negative | 109316 - 111937 | 98433.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





