Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1380 domain-containing protein | EGT48_00240 | Not Available | Negative | 30106 - 30540 | 16034.1 |
| hypothetical protein | EGT48_00245 | Not Available | Negative | 30554 - 30775 | 8675.34 |
| dna methylase | EGT48_00250 | Not Available | Negative | 30776 - 31459 | 25556.6 |
| duf1281 domain-containing protein | EGT48_00260 | Not Available | Negative | 31873 - 32814 | 35834.5 |
| hypothetical protein | EGT48_00265 | Not Available | Negative | 32783 - 33055 | 9703.94 |
| parb/repb/spo0j family plasmid partition protein | EGT48_00275 | Not Available | Negative | 33612 - 34583 | 35318.2 |
| protein sopa | EGT48_00280 | Not Available | Negative | 34583 - 35749 | 43662.6 |
| replication initiation protein | EGT48_00285 | Not Available | Negative | 36337 - 37092 | 29360.2 |
| phage integrase family protein | EGT48_00290 | Not Available | Negative | 37866 - 38672 | 29602.2 |
| toxin ccdb | EGT48_00295 | Not Available | Negative | 38673 - 38978 | 11707.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





