Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication protein repa | EGT48_00050 | Not Available | Negative | 4981 - 5094 | 4193.11 |
| positive regulator of repfic repa1 expression | EGT48_00055 | Not Available | Positive | 5175 - 5249 | 2699.38 |
| incfii family plasmid replication initiator repa | EGT48_00060 | Not Available | Positive | 5242 - 6099 | 32701.5 |
| hypothetical protein | EGT48_00065 | Not Available | Positive | 6462 - 6848 | 14196.9 |
| duf3560 domain-containing protein | EGT48_00200 | Not Available | Negative | 25102 - 26463 | 51807.3 |
| hypothetical protein | EGT48_00205 | Not Available | Negative | 26515 - 26745 | 8582.57 |
| hypothetical protein | EGT48_00210 | Not Available | Positive | 27006 - 27428 | 15391.6 |
| hypothetical protein | EGT48_00215 | Not Available | Negative | 27780 - 27971 | 7264.75 |
| duf1380 domain-containing protein | EGT48_00220 | Not Available | Negative | 27968 - 28390 | 15588.5 |
| antirestriction protein | EGT48_00225 | Not Available | Negative | 28437 - 28739 | 11534.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





