Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | EGT48_26830 | Not Available | Positive | 5297276 - 5297974 | 25828.4 |
| Putative tail fiber component | EGT48_26835 | Not Available | Positive | 5297985 - 5298728 | 28254.4 |
| Putative tail component | EGT48_26840 | Not Available | Positive | 5298674 - 5299306 | 22167.8 |
| Putative tail fiber component j | EGT48_26845 | Not Available | Positive | 5299649 - 5303122 | 126685.0 |
| Lom protein | EGT48_26850 | Not Available | Positive | 5303190 - 5303570 | 14067.3 |
| Is21 transposase | EGT48_26855 | Not Available | Positive | 5303763 - 5305304 | 59358.6 |
| Transposase/is protein | EGT48_26860 | Not Available | Positive | 5305319 - 5306065 | 28348.2 |
| Outer membrane protein lom precursor | EGT48_26865 | Not Available | Positive | 5306148 - 5306375 | 8060.09 |
| Tail fiber protein | EGT48_26870 | Not Available | Positive | 5306527 - 5309433 | 96976.4 |
| Tail fiber assembly protein | EGT48_26875 | Not Available | Positive | 5309449 - 5309976 | 20269.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





