Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | EGT48_24495 | Not Available | Positive | 4871369 - 4872601 | 47576.5 |
| protein ycar | EGT48_24500 | Not Available | Positive | 4872653 - 4872835 | 6825.33 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | EGT48_24505 | Not Available | Positive | 4872832 - 4873578 | 27660.1 |
| hypothetical protein | EGT48_24510 | Not Available | Positive | 4873732 - 4874625 | 34502.6 |
| envelope biogenesis factor elyc | EGT48_24515 | Not Available | Negative | 4874602 - 4875381 | 28668.0 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | EGT48_24520 | Not Available | Positive | 4875517 - 4876302 | 29779.9 |
| chromosome partition protein mukf | EGT48_24525 | Not Available | Positive | 4876299 - 4877621 | 50609.8 |
| chromosome partition protein muke | EGT48_24530 | Not Available | Positive | 4877602 - 4878306 | 26949.0 |
| chromosome partition protein mukb | EGT48_24535 | Not Available | Positive | 4878306 - 4882766 | 170252.0 |
| l,d-transpeptidase | EGT48_24540 | Not Available | Positive | 4883027 - 4884874 | 67844.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





