Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1116 domain-containing protein | EGT48_22040 | Not Available | Positive | 4397034 - 4398293 | 44980.7 |
| duf2877 domain-containing protein | EGT48_22045 | Not Available | Positive | 4398304 - 4399119 | 29667.9 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EGT48_22055 | Not Available | Negative | 4400542 - 4401609 | 39439.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EGT48_22060 | Not Available | Negative | 4401606 - 4402115 | 17781.3 |
| hypothetical protein | EGT48_22065 | Not Available | Negative | 4402211 - 4402540 | 12241.1 |
| udp-2,3-diacylglucosamine diphosphatase | EGT48_22070 | Not Available | Negative | 4402651 - 4403373 | 26876.6 |
| peptidyl-prolyl cis-trans isomerase | EGT48_22075 | Not Available | Negative | 4403376 - 4403870 | 18154.5 |
| cysteine--trna ligase | EGT48_22080 | Not Available | Positive | 4404044 - 4405429 | 52186.0 |
| metal-dependent hydrolase | EGT48_22085 | Not Available | Negative | 4405465 - 4405986 | 19598.6 |
| ribosome-associated protein ybcj | EGT48_22090 | Not Available | Negative | 4406094 - 4406306 | 7374.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





