Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | EGT48_21530 | Not Available | Negative | 4287030 - 4288004 | 36450.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EGT48_21535 | Not Available | Negative | 4288059 - 4289921 | 67636.9 |
| (2e,6e)-farnesyl diphosphate synthase | EGT48_21540 | Not Available | Negative | 4289946 - 4290845 | 32225.5 |
| exodeoxyribonuclease 7 small subunit | EGT48_21545 | Not Available | Negative | 4290845 - 4291087 | 8952.42 |
| trna 4-thiouridine(8) synthase thii | EGT48_21550 | Not Available | Positive | 4291293 - 4292741 | 54976.3 |
| protein deglycase yajl | EGT48_21555 | Not Available | Negative | 4292795 - 4293385 | 20793.2 |
| 2-dehydropantoate 2-reductase | EGT48_21560 | Not Available | Negative | 4293348 - 4294259 | 33858.7 |
| yajq family cyclic di-gmp-binding protein | EGT48_21565 | Not Available | Positive | 4294427 - 4294918 | 18344.9 |
| mfs transporter | EGT48_21570 | Not Available | Negative | 4295046 - 4296410 | 48816.0 |
| protoheme ix farnesyltransferase | EGT48_21575 | Not Available | Negative | 4296559 - 4297449 | 32232.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





