Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | EGT48_21480 | Not Available | Positive | 4279512 - 4280483 | 35384.6 |
| hnh endonuclease | EGT48_21485 | Not Available | Positive | 4280613 - 4280960 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | EGT48_21490 | Not Available | Negative | 4280998 - 4281882 | 33625.6 |
| duf3251 domain-containing protein | EGT48_21495 | Not Available | Negative | 4282181 - 4282720 | 19563.6 |
| transcriptional regulator nrdr | EGT48_21500 | Not Available | Positive | 4282871 - 4283320 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EGT48_21505 | Not Available | Positive | 4283324 - 4284427 | 40396.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | EGT48_21510 | Not Available | Positive | 4284516 - 4284986 | 16157.4 |
| n utilization substance protein b | EGT48_21515 | Not Available | Positive | 4285006 - 4285425 | 15689.9 |
| thiamine-phosphate kinase | EGT48_21520 | Not Available | Positive | 4285503 - 4286480 | 35072.8 |
| phosphatidylglycerophosphatase a | EGT48_21525 | Not Available | Positive | 4286458 - 4286976 | 19491.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





