Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | EGT48_21375 | Not Available | Positive | 4256392 - 4256916 | 19151.9 |
| protein yaia | EGT48_21380 | Not Available | Positive | 4256966 - 4257157 | 7281.55 |
| arom family protein | EGT48_21385 | Not Available | Positive | 4257415 - 4258092 | 24932.5 |
| pyrimidine/purine nucleoside phosphorylase | EGT48_21390 | Not Available | Positive | 4258164 - 4258448 | 10234.9 |
| hypothetical protein | EGT48_21400 | Not Available | Positive | 4258934 - 4259014 | 3060.81 |
| recombination-associated protein rdgc | EGT48_21405 | Not Available | Negative | 4259095 - 4260006 | 34023.3 |
| fructokinase | EGT48_21410 | Not Available | Positive | 4260131 - 4261039 | 32492.6 |
| mfs transporter araj | EGT48_21415 | Not Available | Negative | 4261308 - 4262492 | 41987.1 |
| exonuclease subunit sbcc | EGT48_21420 | Not Available | Negative | 4262618 - 4265761 | 118603.0 |
| exonuclease subunit sbcd | EGT48_21425 | Not Available | Negative | 4265758 - 4266960 | 44627.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





