Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbria adhesin ecpd | EGT48_20905 | Not Available | Negative | 4151667 - 4153310 | 59937.1 |
| usher protein ecpc | EGT48_20910 | Not Available | Negative | 4153300 - 4155825 | 91327.7 |
| fimbrial chaperone ecpb | EGT48_20915 | Not Available | Negative | 4155851 - 4156519 | 24502.3 |
| common pilus major fimbrillin subunit ecpa | EGT48_20920 | Not Available | Negative | 4156576 - 4157163 | 20082.4 |
| luxr family transcriptional regulator | EGT48_20925 | Not Available | Negative | 4157238 - 4157780 | 21231.8 |
| hypothetical protein | EGT48_20930 | Not Available | Positive | 4158252 - 4158542 | 10534.3 |
| 50s ribosomal protein l36 | EGT48_20940 | Not Available | Negative | 4158864 - 4159004 | 5466.94 |
| 50s ribosomal protein l31 type b | EGT48_20945 | Not Available | Negative | 4159004 - 4159267 | 9920.71 |
| hypothetical protein | EGT48_20950 | Not Available | Negative | 4159632 - 4159733 | 3999.01 |
| nadh-dependent flavin oxidoreductase | EGT48_20955 | Not Available | Negative | 4160206 - 4161348 | 41903.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





