Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EGT48_20840 | Not Available | Negative | 4138867 - 4139052 | 6504.63 |
| hypothetical protein | EGT48_20845 | Not Available | Negative | 4139232 - 4140479 | 47521.4 |
| sam-dependent dna methyltransferase | EGT48_20850 | Not Available | Negative | 4140469 - 4142106 | 61653.5 |
| type i restriction endonuclease subunit r | EGT48_20855 | Not Available | Negative | 4142100 - 4145198 | 119854.0 |
| hypothetical protein | EGT48_20860 | Not Available | Positive | 4145461 - 4146264 | 29964.9 |
| nucleotidyl transferase abieii/abigii toxin family protein | EGT48_20865 | Not Available | Positive | 4146251 - 4147171 | 34572.8 |
| hypothetical protein | EGT48_20880 | Not Available | Positive | 4149089 - 4149274 | 6723.26 |
| duf1440 domain-containing protein | EGT48_20885 | Not Available | Positive | 4149489 - 4150103 | 22984.1 |
| ykgj family cysteine cluster protein | EGT48_20895 | Not Available | Negative | 4150352 - 4150681 | 11830.0 |
| fimbrial chaperone ecpe | EGT48_20900 | Not Available | Negative | 4150988 - 4151698 | 26621.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





