Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase | EGT48_20215 | Not Available | Positive | 4020594 - 4022111 | 59407.3 |
| serine endoprotease degp | EGT48_20220 | Not Available | Positive | 4022241 - 4023665 | 49326.3 |
| cdar family transcriptional regulator | EGT48_20225 | Not Available | Positive | 4023820 - 4024977 | 43660.1 |
| duf3461 family protein | EGT48_20230 | Not Available | Negative | 4025031 - 4025417 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EGT48_20235 | Not Available | Negative | 4025727 - 4026551 | 29892.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein | EGT48_20240 | Not Available | Negative | 4026582 - 4029254 | 102414.0 |
| type i methionyl aminopeptidase | EGT48_20245 | Not Available | Negative | 4029316 - 4030110 | 29332.5 |
| 30s ribosomal protein s2 | EGT48_20250 | Not Available | Positive | 4030478 - 4031203 | 26745.2 |
| elongation factor ts | EGT48_20255 | Not Available | Positive | 4031338 - 4032189 | 30424.7 |
| ump kinase | EGT48_20260 | Not Available | Positive | 4032336 - 4033061 | 25971.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





