Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapd | EGT48_19860 | Not Available | Negative | 3943663 - 3944406 | 28279.3 |
| dephospho-coa kinase | EGT48_19865 | Not Available | Negative | 3944406 - 3945026 | 22623.0 |
| gmp reductase | EGT48_19870 | Not Available | Positive | 3945251 - 3946294 | 37454.9 |
| type iv pilin biogenesis protein | EGT48_19875 | Not Available | Negative | 3946329 - 3947531 | 44274.0 |
| prepilin peptidase-dependent pilin | EGT48_19885 | Not Available | Negative | 3948916 - 3949356 | 15621.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | EGT48_19890 | Not Available | Negative | 3949560 - 3950453 | 32774.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EGT48_19895 | Not Available | Positive | 3950541 - 3951092 | 20520.1 |
| beta-lactamase regulator ampe | EGT48_19900 | Not Available | Positive | 3951089 - 3951943 | 32122.8 |
| aromatic amino acid transporter arop | EGT48_19905 | Not Available | Negative | 3951986 - 3953356 | 49561.9 |
| type vi secretion system tube protein hcp | EGT48_19910 | Not Available | Positive | 3953884 - 3955665 | 65825.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





